Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811033.1_cds_XP_016496513.1_10723
CDS Infomation

[gene=LOC107815447] [db_xref=GeneID:107815447] [protein=probable protein phosphatase 2C 25] [protein_id=XP_016496513.1] [location=join(250328..250789,251664..252002,252312..252491,252818..252982)] [gbkey=CDS]
Sequence

ATGCCTTGTGCAATAGCATTAACAAACTCTCCAATCTTCTCACCATCACAACAAACACCA
AAACTACTTTCACCATATTTCTGTAAACCATCGTCTGTATCATCACCAGCAAATCACAAG
TCCTTTTATGTGTCATCATCTTTATTATCTCCTTCACCAAAATCACCTCTATCGCCGTTG
ACTTACAACAGAAATCTCAGAGAAGAGGAGGAGAAGGAGGAGGCGGTGTGTTCCACGTCA
TCATCGTCGACGATTTTGAAGAGGAAAAGACCGGCGAGGATCACGATTCCGATTGGCTCG
TTGAGTTTAGAACACGCGCCGAGGGAAGAGAGTGGTCAAATGGATGAAGTGGAAGTTGAA
GAAGAAGGGTACTCTGTTTTTTGTAAGAGAGGGAAGAAGAGGGGTGATATGGAGGATCGC
TATTCGGCCGTAATTGATCATGCTAAGGATGGCTCTAAACAGGCCATTTTTGGTGTATTT
GATGGGCATGGAGGAGCAAAAGCTGCCGAGTTCGCAGCAAAGAATTTGGGCAGGAACATT
ATAAATGAAGTAGCGTTAAGGAGTGAAGACGGACTTGAAGAGGCAGTGAGAGAGGGTTAC
CTTTCTACAGAGACAGACTTCCTAAAGCTAAATACAAATGGAGGGAGTTGTTGTGTTACA
GCACTGATACAAAATGGACAACTTATTGTATCAAATGCCGGCGATTGTCGCGCTGTAATG
AGCAGAGGAGGCGTAGCAGAGGCGCTCACAGTCGATCACCGGCCTTCTAGGCAAGATGAA
ATGGAAAGAATTCAGAGTCTGGGTGGTTATGTAGATTGTTGCCGGGGTGTGTGGAGAATT
CAAGGATCTCTAGCTGTATCAAGAGGAATAGGAGATTCTCATCTTAAAAGATGGGTAATA
GCTGAACCGGAGACAAAAATATTGACTATTGAACCAGAATGTGAATTCTTGATCCTTGCC
TCTGATGGACTTTGGGAAAAGGTTACTAATCAGGAGGCGGTGGAGGTAGCGCGACCTTTG
TGCATAGGTGTTGATAACGTACAACGATTATCTGCTTGTAAAAAGCTTATTGATTTGGCA
GTAATGAGAGGATCCTCTGATGATATAAGCGCAATGATCATTCAGCTAAGTCAATTTGTT
CAATAA

Peptide Sequence

PEP ID

XP_016496513.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 25 [Nicotiana tabacum]
Sequence

MPCAIALTNSPIFSPSQQTPKLLSPYFCKPSSVSSPANHKSFYVSSSLLSPSPKSPLSPL
TYNRNLREEEEKEEAVCSTSSSSTILKRKRPARITIPIGSLSLEHAPREESGQMDEVEVE
EEGYSVFCKRGKKRGDMEDRYSAVIDHAKDGSKQAIFGVFDGHGGAKAAEFAAKNLGRNI
INEVALRSEDGLEEAVREGYLSTETDFLKLNTNGGSCCVTALIQNGQLIVSNAGDCRAVM
SRGGVAEALTVDHRPSRQDEMERIQSLGGYVDCCRGVWRIQGSLAVSRGIGDSHLKRWVI
AEPETKILTIEPECEFLILASDGLWEKVTNQEAVEVARPLCIGVDNVQRLSACKKLIDLA
VMRGSSDDISAMIIQLSQFVQ

Transcript Sequence

Gene sequence data has not been registered.